I'd give the guy a pat on the back for giving your car a nice clean and sleek look.
Also, you can adjust how high the strut comes out of the tower by using the spacers included in the kit. To make it lower, you put more spacers over the top of the strut before you guide it into the tower. As long as it clears the hood and the car aligns correctly, I wouldn't worry about changing anything though.
BTW, those rims look sweet on that color car.