You can either touch it up by yourself, or have a local paint shop do it a little bit more professionally. Either way, it won't look good up close (unless you cover it with a louver, etc.). As a last resort, you can pay a paint shop to refinish your clear coat in that area/panel.
I removed my door moldings (ex-rental car) and the clear was chipping and spreading bad. I had them sanded and refinished. I've also had a few other areas professionally touched up as well.